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Bioluminescence tomography using eigenvectors expansion and iterative solution for the optimized permissible source region

机译:使用特征向量展开和迭代解的生物发光层析成像,以优化允许的源区域

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摘要

A reconstruction algorithm for bioluminescence tomography (BLT) has been developed. The algorithm numerically calculates the Green’s function at different wavelengths using the diffusion equation and finite element method. The optical properties used in calculating the Green’s function are reconstructed using diffuse optical tomography (DOT) and assuming anatomical information is provided by x-ray computed tomography or other methods. A symmetric system of equations is formed using the Green’s function and the measured light fluence rate and the resulting eigenvalue problem is solved to get the eigenvectors of this symmetric system of equations. A space can be formed from the eigenvectors obtained and the reconstructed source is written as an expansion of the eigenvectors corresponding to non-zero eigenvalues. The coefficients of the expansion are found to obtain the reconstructed BL source distribution. The problem is solved iteratively by using a permissible source region that is shrunk by removing nodes with low probability to contribute to the source. Throughout this process the permissible region shrinks from the entire object to just a few nodes. The best estimate of the reconstructed source is chosen that which minimizes the difference between the calculated and measured light fluence rates. 3D simulations presented here show that the reconstructed source is in good agreement with the actual source in terms of locations, magnitudes, sizes, and total powers for both localized multiple sources and large inhomogeneous source distributions.
机译:已经开发了用于生物发光层析成像(BLT)的重建算法。该算法使用扩散方程和有限元方法对不同波长的格林函数进行数值计算。使用扩散光学层析成像(DOT)重建了用于计算格林函数的光学特性,并假设通过X射线计算机层析成像或其他方法提供了解剖学信息。利用格林函数和测得的光通量率形成一个对称的方程组,并解决由此产生的特征值问题,以获得该对称方程组的特征向量。可以从获得的特征向量中形成一个空间,并将重构的源写入对应于非零特征值的特征向量的扩展。找到扩展系数以获得重构的BL源分布。通过使用允许的源区域来迭代地解决该问题,该源区域通过删除具有低贡献度的节点而缩小了。在整个过程中,允许区域从整个对象缩小到仅几个节点。选择重建光源的最佳估计值,该估计值可以最大程度地减少计算和测量的光通量率之间的差异。此处呈现的3D模拟表明,对于局部多个源和较大的不均匀源分布,重构的源在位置,大小,大小和总功率方面与实际源非常吻合。

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